Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GRIK1P39086 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.78■□□□□ 0.28
GRIK1P39086 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIK1P39086 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRIK1P39086 AL391825.1-201ENST00000457671 1364 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
GRIK1P39086 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRIK1P39086 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIK1P39086 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 AC087499.6-201ENST00000411576 835 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIK1P39086 TARDBPP1-201ENST00000442013 1203 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.78■□□□□ 0.28
GRIK1P39086 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.78■□□□□ 0.28
GRIK1P39086 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 AP005018.1-201ENST00000525475 301 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 AC023310.3-201ENST00000557027 670 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.78■□□□□ 0.28
GRIK1P39086 AC100756.1-201ENST00000562736 682 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 AC138749.3-201ENST00000567691 622 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 LINC01115-203ENST00000606068 577 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 AC116165.1-201ENST00000611806 668 ntBASIC16.78■□□□□ 0.28
GRIK1P39086 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRIK1P39086 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIK1P39086 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIK1P39086 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRIK1P39086 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GRIK1P39086 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GRIK1P39086 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIK1P39086 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.77■□□□□ 0.28
GRIK1P39086 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 MEIS3P1-201ENST00000495167 958 ntBASIC16.77■□□□□ 0.28
GRIK1P39086 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIK1P39086 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
GRIK1P39086 AC092337.1-201ENST00000568699 1129 ntBASIC16.77■□□□□ 0.28
GRIK1P39086 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
GRIK1P39086 AC025048.6-201ENST00000634326 1161 ntBASIC16.77■□□□□ 0.28
GRIK1P39086 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIK1P39086 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIK1P39086 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIK1P39086 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.77■□□□□ 0.27
GRIK1P39086 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.77■□□□□ 0.27
GRIK1P39086 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIK1P39086 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms