Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM23P36406 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM23P36406 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM23P36406 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
TRIM23P36406 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.65■□□□□ 0.1
TRIM23P36406 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM23P36406 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM23P36406 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM23P36406 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 AC239800.4-201ENST00000603712 296 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 AC008494.3-201ENST00000606615 944 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 AC007431.3-201ENST00000623221 587 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM23P36406 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM23P36406 AL607033.1-201ENST00000623900 1599 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM23P36406 AC138969.3-201ENST00000546612 1459 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 AC138932.2-201ENST00000548268 1459 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 AC126755.4-201ENST00000549796 1459 ntBASIC15.65■□□□□ 0.1
TRIM23P36406 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM23P36406 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.64■□□□□ 0.1
TRIM23P36406 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TRIM23P36406 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM23P36406 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.64■□□□□ 0.09
TRIM23P36406 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM23P36406 CDC14C-201ENST00000428251 1719 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM23P36406 KRT18P64-201ENST00000434946 1219 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 MYCLP2-201ENST00000449268 967 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 RN7SL399P-201ENST00000471648 279 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 SLED1-202ENST00000512051 380 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM23P36406 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 AC123567.1-201ENST00000548294 1261 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 TMEM261P1-201ENST00000604899 340 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 AL158212.4-201ENST00000624062 1286 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM23P36406 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM23P36406 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM23P36406 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM23P36406 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM23P36406 FER1L4-210ENST00000615531 5998 ntBASIC15.64■□□□□ 0.09
TRIM23P36406 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM23P36406 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM23P36406 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM23P36406 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM23P36406 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM23P36406 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM23P36406 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM23P36406 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM23P36406 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms