Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 RNF216P1-203ENST00000404404 2427 ntBASIC19.45■□□□□ 0.7
PDE6BP35913 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.45■□□□□ 0.7
PDE6BP35913 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6BP35913 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PDE6BP35913 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDE6BP35913 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.44■□□□□ 0.7
PDE6BP35913 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PDE6BP35913 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDE6BP35913 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE6BP35913 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE6BP35913 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 AL662890.1-201ENST00000396818 632 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6BP35913 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE6BP35913 AC005077.2-201ENST00000449786 690 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6BP35913 GAPDHP40-201ENST00000505218 1006 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE6BP35913 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.44■□□□□ 0.7
PDE6BP35913 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.44■□□□□ 0.7
PDE6BP35913 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.44■□□□□ 0.7
PDE6BP35913 AC015967.2-201ENST00000624092 234 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 AC006435.4-201ENST00000625037 234 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 AL356737.1-201ENST00000634391 234 ntBASIC19.44■□□□□ 0.7
PDE6BP35913 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDE6BP35913 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDE6BP35913 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDE6BP35913 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6BP35913 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDE6BP35913 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PDE6BP35913 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.43■□□□□ 0.7
PDE6BP35913 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6BP35913 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.43■□□□□ 0.7
PDE6BP35913 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PDE6BP35913 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.43■□□□□ 0.7
PDE6BP35913 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.43■□□□□ 0.7
PDE6BP35913 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
PDE6BP35913 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDE6BP35913 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDE6BP35913 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDE6BP35913 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.42■□□□□ 0.7
PDE6BP35913 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.42■□□□□ 0.7
PDE6BP35913 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.42■□□□□ 0.7
PDE6BP35913 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.42■□□□□ 0.7
PDE6BP35913 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.42■□□□□ 0.7
PDE6BP35913 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.42■□□□□ 0.7
PDE6BP35913 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDE6BP35913 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms