Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHMLP26374 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 AC006486.2-201ENST00000624246 2199 ntBASIC19.18■□□□□ 0.66
CHMLP26374 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMLP26374 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.18■□□□□ 0.66
CHMLP26374 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMLP26374 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHMLP26374 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHMLP26374 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMLP26374 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMLP26374 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMLP26374 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMLP26374 DBET-201ENST00000630918 3363 ntBASIC19.18■□□□□ 0.66
CHMLP26374 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 AC138035.3-201ENST00000622706 2791 ntBASIC19.17■□□□□ 0.66
CHMLP26374 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMLP26374 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHMLP26374 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMLP26374 SPDYE7P-202ENST00000420373 878 ntBASIC19.17■□□□□ 0.66
CHMLP26374 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.17■□□□□ 0.66
CHMLP26374 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMLP26374 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMLP26374 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.17■□□□□ 0.66
CHMLP26374 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CHMLP26374 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.17■□□□□ 0.66
CHMLP26374 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 AC023511.2-201ENST00000618803 211 ntBASIC19.17■□□□□ 0.66
CHMLP26374 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CHMLP26374 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMLP26374 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMLP26374 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMLP26374 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHMLP26374 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMLP26374 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMLP26374 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMLP26374 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 AL080243.2-201ENST00000418783 582 ntBASIC19.16■□□□□ 0.66
CHMLP26374 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms