Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
TOP2AP11388 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC27.22■■□□□ 1.95
TOP2AP11388 IMP3P2-201ENST00000489760 475 ntBASIC27.22■■□□□ 1.95
TOP2AP11388 COX5BP1-201ENST00000507622 393 ntBASIC27.22■■□□□ 1.95
TOP2AP11388 AC079328.1-201ENST00000560358 952 ntBASIC27.22■■□□□ 1.95
TOP2AP11388 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC27.22■■□□□ 1.95
TOP2AP11388 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC27.22■■□□□ 1.95
TOP2AP11388 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC27.22■■□□□ 1.95
TOP2AP11388 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
TOP2AP11388 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
TOP2AP11388 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC27.22■■□□□ 1.95
TOP2AP11388 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TOP2AP11388 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 AC007787.1-201ENST00000588095 1583 ntBASIC27.21■■□□□ 1.95
TOP2AP11388 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
TOP2AP11388 FNTAP2-201ENST00000430308 634 ntBASIC27.21■■□□□ 1.95
TOP2AP11388 PFN2-205ENST00000461868 613 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC27.21■■□□□ 1.95
TOP2AP11388 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC27.21■■□□□ 1.95
TOP2AP11388 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TOP2AP11388 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
TOP2AP11388 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
TOP2AP11388 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC27.21■■□□□ 1.95
TOP2AP11388 AL645939.5-201ENST00000606834 243 ntBASIC27.21■■□□□ 1.95
TOP2AP11388 AP001505.2-201ENST00000616815 443 ntBASIC27.21■■□□□ 1.95
TOP2AP11388 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC27.21■■□□□ 1.95
TOP2AP11388 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
TOP2AP11388 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TOP2AP11388 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC27.2■■□□□ 1.95
TOP2AP11388 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
TOP2AP11388 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TOP2AP11388 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC27.2■■□□□ 1.94
TOP2AP11388 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TOP2AP11388 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC27.2■■□□□ 1.94
TOP2AP11388 KRTAP19-9P-201ENST00000421795 191 ntBASIC27.2■■□□□ 1.94
TOP2AP11388 NKAIN1P1-201ENST00000435754 582 ntBASIC27.2■■□□□ 1.94
TOP2AP11388 SPTLC1P5-201ENST00000450718 252 ntBASIC27.2■■□□□ 1.94
TOP2AP11388 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC27.2■■□□□ 1.94
TOP2AP11388 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC27.2■■□□□ 1.94
TOP2AP11388 OR10B1P-201ENST00000601666 907 ntBASIC27.2■■□□□ 1.94
TOP2AP11388 AP001002.3-201ENST00000623482 206 ntBASIC27.2■■□□□ 1.94
TOP2AP11388 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
TOP2AP11388 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TOP2AP11388 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TOP2AP11388 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
TOP2AP11388 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC27.2■■□□□ 1.94
TOP2AP11388 AC084364.1-201ENST00000551967 1556 ntBASIC27.19■■□□□ 1.94
TOP2AP11388 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
TOP2AP11388 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
TOP2AP11388 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
TOP2AP11388 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC27.19■■□□□ 1.94
TOP2AP11388 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC27.19■■□□□ 1.94
TOP2AP11388 AC244157.2-201ENST00000616239 1006 ntBASIC27.19■■□□□ 1.94
TOP2AP11388 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TOP2AP11388 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TOP2AP11388 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC27.18■■□□□ 1.94
TOP2AP11388 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
TOP2AP11388 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TOP2AP11388 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TOP2AP11388 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
TOP2AP11388 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
TOP2AP11388 TPM3P8-201ENST00000330554 643 ntBASIC27.18■■□□□ 1.94
TOP2AP11388 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC27.18■■□□□ 1.94
TOP2AP11388 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC27.18■■□□□ 1.94
TOP2AP11388 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC27.18■■□□□ 1.94
TOP2AP11388 CHMP1AP1-201ENST00000445563 662 ntBASIC27.18■■□□□ 1.94
TOP2AP11388 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms