Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.49□□□□□ -0.41
CD28P10747 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD28P10747 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.49□□□□□ -0.41
CD28P10747 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.48□□□□□ -0.41
CD28P10747 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CD28P10747 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 FO393414.2-201ENST00000405153 598 ntBASIC12.48□□□□□ -0.41
CD28P10747 ARSEP1-201ENST00000420443 635 ntBASIC12.48□□□□□ -0.41
CD28P10747 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 POU5F1P6-201ENST00000466990 990 ntBASIC12.48□□□□□ -0.41
CD28P10747 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 HILS1-202ENST00000545329 423 ntBASIC12.48□□□□□ -0.41
CD28P10747 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.48□□□□□ -0.41
CD28P10747 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 AC025048.3-201ENST00000590609 569 ntBASIC12.48□□□□□ -0.41
CD28P10747 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 AC005702.4-201ENST00000618393 416 ntBASIC12.48□□□□□ -0.41
CD28P10747 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CD28P10747 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CD28P10747 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
CD28P10747 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD28P10747 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
CD28P10747 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.48□□□□□ -0.41
CD28P10747 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 AC018695.7-201ENST00000624587 2492 ntBASIC12.47□□□□□ -0.41
CD28P10747 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CD28P10747 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CD28P10747 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CD28P10747 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 HIST3H2BA-201ENST00000436555 524 ntBASIC12.47□□□□□ -0.41
CD28P10747 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 ELK1P1-201ENST00000485699 580 ntBASIC12.47□□□□□ -0.41
CD28P10747 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 IGHV3-71-201ENST00000523324 359 ntBASIC12.47□□□□□ -0.41
CD28P10747 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms