Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.53■□□□□ 0.24
CD48P09326 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.53■□□□□ 0.24
CD48P09326 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD48P09326 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.52■□□□□ 0.24
CD48P09326 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.52■□□□□ 0.24
CD48P09326 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 AC023824.1-201ENST00000562945 2975 ntBASIC16.52■□□□□ 0.24
CD48P09326 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.52■□□□□ 0.24
CD48P09326 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.52■□□□□ 0.24
CD48P09326 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 AZGP1P1-201ENST00000411909 902 ntBASIC16.52■□□□□ 0.24
CD48P09326 AC254562.1-201ENST00000417586 456 ntBASIC16.52■□□□□ 0.24
CD48P09326 AL353705.2-201ENST00000428243 662 ntBASIC16.52■□□□□ 0.24
CD48P09326 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD48P09326 MIR4453-201ENST00000584019 89 ntBASIC16.52■□□□□ 0.24
CD48P09326 AL450472.2-201ENST00000603663 1156 ntBASIC16.52■□□□□ 0.24
CD48P09326 AL133215.2-201ENST00000609242 977 ntBASIC16.52■□□□□ 0.24
CD48P09326 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.52■□□□□ 0.24
CD48P09326 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD48P09326 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD48P09326 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD48P09326 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CD48P09326 AC068418.2-201ENST00000577309 3703 ntBASIC16.52■□□□□ 0.23
CD48P09326 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CD48P09326 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 AC004967.1-201ENST00000453589 447 ntBASIC16.51■□□□□ 0.23
CD48P09326 PHKG1P2-201ENST00000457537 863 ntBASIC16.51■□□□□ 0.23
CD48P09326 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 HNRNPUP1-201ENST00000554987 333 ntBASIC16.51■□□□□ 0.23
CD48P09326 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CD48P09326 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 AC097359.3-201ENST00000603982 1210 ntBASIC16.51■□□□□ 0.23
CD48P09326 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.51■□□□□ 0.23
CD48P09326 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD48P09326 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
CD48P09326 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.51■□□□□ 0.23
CD48P09326 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD48P09326 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CD48P09326 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 KRT18P13-201ENST00000400056 1290 ntBASIC16.5■□□□□ 0.23
CD48P09326 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms