Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 AC073621.1-201ENST00000392730 636 ntBASIC13.29□□□□□ -0.28
CTSDP07339 MRPL20P1-201ENST00000400819 433 ntBASIC13.29□□□□□ -0.28
CTSDP07339 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.29□□□□□ -0.28
CTSDP07339 FAM185BP-201ENST00000443595 716 ntBASIC13.29□□□□□ -0.28
CTSDP07339 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.29□□□□□ -0.28
CTSDP07339 KRT18P56-201ENST00000507275 550 ntBASIC13.29□□□□□ -0.28
CTSDP07339 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.29□□□□□ -0.28
CTSDP07339 AC021087.4-201ENST00000563761 564 ntBASIC13.29□□□□□ -0.28
CTSDP07339 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.29□□□□□ -0.28
CTSDP07339 ACTL9-202ENST00000612068 1252 ntBASIC13.29□□□□□ -0.28
CTSDP07339 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CTSDP07339 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CTSDP07339 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSDP07339 C8orf49-201ENST00000525043 1968 ntBASIC13.29□□□□□ -0.28
CTSDP07339 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSDP07339 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.28□□□□□ -0.28
CTSDP07339 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.28□□□□□ -0.28
CTSDP07339 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 AL645728.2-201ENST00000641974 660 ntBASIC13.28□□□□□ -0.28
CTSDP07339 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CTSDP07339 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CTSDP07339 AC009090.5-201ENST00000624886 2285 ntBASIC13.28□□□□□ -0.28
CTSDP07339 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSDP07339 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSDP07339 LINC00552-201ENST00000625151 2579 ntBASIC13.27□□□□□ -0.28
CTSDP07339 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.27□□□□□ -0.28
CTSDP07339 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CTSDP07339 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms