Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.33■□□□□ 0.2
MT-ND3P03897 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 HTR5BP-201ENST00000430851 1154 ntBASIC16.33■□□□□ 0.2
MT-ND3P03897 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.33■□□□□ 0.2
MT-ND3P03897 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND3P03897 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 PDPK2P-202ENST00000562415 1191 ntBASIC16.33■□□□□ 0.2
MT-ND3P03897 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND3P03897 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.33■□□□□ 0.2
MT-ND3P03897 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 AC023141.13-201ENST00000604991 943 ntBASIC16.33■□□□□ 0.2
MT-ND3P03897 AC004877.2-201ENST00000623941 599 ntBASIC16.33■□□□□ 0.2
MT-ND3P03897 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 AL136379.1-201ENST00000623471 2642 ntBASIC16.33■□□□□ 0.2
MT-ND3P03897 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MT-ND3P03897 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND3P03897 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND3P03897 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND3P03897 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND3P03897 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 HAUS4P1-201ENST00000406739 1145 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.32■□□□□ 0.2
MT-ND3P03897 RHOQP3-201ENST00000437982 621 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 ACTG1P14-201ENST00000446382 1122 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND3P03897 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MT-ND3P03897 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND3P03897 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MT-ND3P03897 BCAR1-209ENST00000546196 1340 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
MT-ND3P03897 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.32■□□□□ 0.2
MT-ND3P03897 MIR4469-201ENST00000583919 79 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND3P03897 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 CICP13-201ENST00000422015 2789 ntBASIC16.32■□□□□ 0.2
MT-ND3P03897 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND3P03897 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND3P03897 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND3P03897 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND3P03897 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 IGLL3P-201ENST00000412472 434 ntBASIC16.31■□□□□ 0.2
MT-ND3P03897 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND3P03897 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms