Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 BCRP2-202ENST00000447763 634 ntBASIC18.91■□□□□ 0.62
COL1A1P02452 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 BCRP6-201ENST00000510112 632 ntBASIC18.91■□□□□ 0.62
COL1A1P02452 BCRP7-201ENST00000511549 544 ntBASIC18.91■□□□□ 0.62
COL1A1P02452 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL1A1P02452 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.91■□□□□ 0.62
COL1A1P02452 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.91■□□□□ 0.62
COL1A1P02452 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.91■□□□□ 0.62
COL1A1P02452 AC244669.2-201ENST00000612320 853 ntBASIC18.91■□□□□ 0.62
COL1A1P02452 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.91■□□□□ 0.62
COL1A1P02452 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.91■□□□□ 0.62
COL1A1P02452 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL1A1P02452 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL1A1P02452 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.91■□□□□ 0.62
COL1A1P02452 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.91■□□□□ 0.62
COL1A1P02452 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COL1A1P02452 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL1A1P02452 FTH1P14-201ENST00000482930 551 ntBASIC18.9■□□□□ 0.62
COL1A1P02452 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 AC079316.1-201ENST00000548397 411 ntBASIC18.9■□□□□ 0.62
COL1A1P02452 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 AC244093.1-201ENST00000610837 814 ntBASIC18.9■□□□□ 0.62
COL1A1P02452 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.9■□□□□ 0.62
COL1A1P02452 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL1A1P02452 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.9■□□□□ 0.62
COL1A1P02452 AC009090.5-201ENST00000624886 2285 ntBASIC18.9■□□□□ 0.62
COL1A1P02452 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL1A1P02452 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.9■□□□□ 0.62
COL1A1P02452 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.9■□□□□ 0.62
COL1A1P02452 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 AC108725.1-201ENST00000495472 409 ntBASIC18.9■□□□□ 0.62
COL1A1P02452 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.9■□□□□ 0.62
COL1A1P02452 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.9■□□□□ 0.62
COL1A1P02452 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL1A1P02452 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.89■□□□□ 0.62
COL1A1P02452 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.89■□□□□ 0.62
COL1A1P02452 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.89■□□□□ 0.61
COL1A1P02452 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.89■□□□□ 0.61
COL1A1P02452 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL1A1P02452 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms