Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD4O95243 AL158212.4-201ENST00000624062 1286 ntBASIC18.95■□□□□ 0.62
MBD4O95243 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 AC025048.6-201ENST00000634326 1161 ntBASIC18.95■□□□□ 0.62
MBD4O95243 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD4O95243 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MBD4O95243 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MBD4O95243 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD4O95243 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MBD4O95243 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD4O95243 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD4O95243 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.94■□□□□ 0.62
MBD4O95243 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.94■□□□□ 0.62
MBD4O95243 TP53TG3HP-202ENST00000569755 579 ntBASIC18.94■□□□□ 0.62
MBD4O95243 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 AC008494.3-201ENST00000606615 944 ntBASIC18.94■□□□□ 0.62
MBD4O95243 AL391069.4-201ENST00000609583 481 ntBASIC18.94■□□□□ 0.62
MBD4O95243 AC007431.3-201ENST00000623221 587 ntBASIC18.94■□□□□ 0.62
MBD4O95243 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD4O95243 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MBD4O95243 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD4O95243 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD4O95243 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MBD4O95243 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD4O95243 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.93■□□□□ 0.62
MBD4O95243 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MBD4O95243 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.93■□□□□ 0.62
MBD4O95243 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MBD4O95243 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
MBD4O95243 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
MBD4O95243 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD4O95243 AL391825.1-201ENST00000457671 1364 ntBASIC18.93■□□□□ 0.62
MBD4O95243 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MBD4O95243 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD4O95243 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD4O95243 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MBD4O95243 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.92■□□□□ 0.62
MBD4O95243 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD4O95243 AC087499.6-201ENST00000411576 835 ntBASIC18.92■□□□□ 0.62
MBD4O95243 AC098850.1-201ENST00000419919 790 ntBASIC18.92■□□□□ 0.62
MBD4O95243 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD4O95243 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.92■□□□□ 0.62
MBD4O95243 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms