Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZNF253O75346 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
ZNF253O75346 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZNF253O75346 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF253O75346 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 U82695.1-201ENST00000635752 1889 ntBASIC12.51□□□□□ -0.41
ZNF253O75346 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
ZNF253O75346 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF253O75346 KRT18P27-201ENST00000427733 1299 ntBASIC12.51□□□□□ -0.41
ZNF253O75346 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 MIR3652-201ENST00000579335 131 ntBASIC12.51□□□□□ -0.41
ZNF253O75346 LINC01711-201ENST00000598340 967 ntBASIC12.51□□□□□ -0.41
ZNF253O75346 AC008667.4-201ENST00000607370 168 ntBASIC12.51□□□□□ -0.41
ZNF253O75346 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF253O75346 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF253O75346 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF253O75346 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF253O75346 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 TSPY19P-201ENST00000418461 509 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 TSPY18P-201ENST00000441642 509 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF253O75346 AC136632.2-201ENST00000512891 861 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF253O75346 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF253O75346 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.5□□□□□ -0.41
ZNF253O75346 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 AC021097.1-201ENST00000607902 574 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ZNF253O75346 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ZNF253O75346 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 AC006486.2-201ENST00000624246 2199 ntBASIC12.5□□□□□ -0.41
ZNF253O75346 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF253O75346 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF253O75346 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF253O75346 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms