Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 LINC02447-202ENST00000501888 2146 ntBASIC20.24■□□□□ 0.83
KCNQ3O43525 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KCNQ3O43525 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 AC106760.1-201ENST00000508690 800 ntBASIC20.24■□□□□ 0.83
KCNQ3O43525 ENPP7P5-201ENST00000541031 1031 ntBASIC20.24■□□□□ 0.83
KCNQ3O43525 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNQ3O43525 AC015910.1-201ENST00000579400 975 ntBASIC20.24■□□□□ 0.83
KCNQ3O43525 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.24■□□□□ 0.83
KCNQ3O43525 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 AC244669.2-201ENST00000612320 853 ntBASIC20.24■□□□□ 0.83
KCNQ3O43525 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ3O43525 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ3O43525 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ3O43525 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC112504.1-201ENST00000623415 1841 ntBASIC20.23■□□□□ 0.83
KCNQ3O43525 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KCNQ3O43525 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNQ3O43525 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.23■□□□□ 0.83
KCNQ3O43525 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.23■□□□□ 0.83
KCNQ3O43525 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.23■□□□□ 0.83
KCNQ3O43525 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
KCNQ3O43525 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNQ3O43525 AC010491.1-201ENST00000563101 2797 ntBASIC20.23■□□□□ 0.83
KCNQ3O43525 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ3O43525 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNQ3O43525 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
KCNQ3O43525 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.22■□□□□ 0.83
KCNQ3O43525 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNQ3O43525 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNQ3O43525 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms