Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 HTR5BP-201ENST00000430851 1154 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 ACTG1P14-201ENST00000446382 1122 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 DNAJB3-201ENST00000446806 729 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AC245100.5-201ENST00000452108 331 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 RNA5SP410-201ENST00000516285 106 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 PGAM5P1-201ENST00000518923 814 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AC024267.1-201ENST00000582320 895 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 MIR4321-201ENST00000592276 80 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 UXT-AS1-201ENST00000590504 1525 ntBASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
TRGV1A0A0A0MS02 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CEND1P1-201ENST00000451006 455 ntBASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 MIR3687-2-201ENST00000577708 61 ntBASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 MIR3687-1-201ENST00000614492 61 ntBASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms