Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 AC002056.1-201ENST00000395613 760 ntBASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 AL390955.2-201ENST00000603032 514 ntBASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX49Q9Y6V7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 AL031731.1-201ENST00000642131 2094 ntBASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 SNX33P1-201ENST00000592116 1762 ntBASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 MIR4515-201ENST00000584082 81 ntBASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX49Q9Y6V7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 TFAMP1-201ENST00000412727 736 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 FAM8A3P-201ENST00000427218 844 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AC005237.2-201ENST00000434368 219 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AC069335.1-201ENST00000489972 472 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 DUX4L27-201ENST00000554796 1261 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AL135744.1-201ENST00000565098 629 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 Z92544.3-201ENST00000624747 417 ntBASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX49Q9Y6V7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms