Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AC025048.3-201ENST00000590609 569 ntBASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AC005702.4-201ENST00000618393 416 ntBASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AC022532.1-201ENST00000624563 1728 ntBASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC3Q9UN70 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 AC090616.6-203ENST00000579186 1945 ntBASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 AC010336.2-201ENST00000564226 506 ntBASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC3Q9UN70 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC127383.1-201ENST00000444697 1800 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 SSR4P1-203ENST00000599569 2260 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC087499.5-201ENST00000452760 1342 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 TMBIM7P-203ENST00000641617 1718 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC074338.1-201ENST00000416825 156 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC027369.6-201ENST00000525520 931 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 ZNF890P-202ENST00000530367 1156 ntBASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGC3Q9UN70 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC3Q9UN70 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms