Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 AP005482.1-201ENST00000563722 1273 ntBASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 AC107373.2-201ENST00000607735 490 ntBASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 AC005252.2-201ENST00000624630 1141 ntBASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPO2Q9UMS6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AC012441.1-201ENST00000446669 685 ntBASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AC022137.2-201ENST00000503482 481 ntBASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AL645728.2-202ENST00000641679 227 ntBASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 AC018665.1-201ENST00000622927 1362 ntBASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPO2Q9UMS6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 BAATP1-201ENST00000412284 1225 ntBASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 AP001889.1-201ENST00000525414 633 ntBASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPO2Q9UMS6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 MIR1909-201ENST00000411312 80 ntBASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms