Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
HACD3Q9P035 AC027612.4-201ENST00000605371 583 ntBASIC16.21■□□□□ 0.19
HACD3Q9P035 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.21■□□□□ 0.19
HACD3Q9P035 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.21■□□□□ 0.19
HACD3Q9P035 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 CDC14C-201ENST00000428251 1719 ntBASIC16.21■□□□□ 0.19
HACD3Q9P035 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HACD3Q9P035 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HACD3Q9P035 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HACD3Q9P035 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.21■□□□□ 0.19
HACD3Q9P035 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HACD3Q9P035 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HACD3Q9P035 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HACD3Q9P035 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HACD3Q9P035 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HACD3Q9P035 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HACD3Q9P035 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HACD3Q9P035 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HACD3Q9P035 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.2■□□□□ 0.18
HACD3Q9P035 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HACD3Q9P035 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.2■□□□□ 0.18
HACD3Q9P035 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.2■□□□□ 0.18
HACD3Q9P035 RPS8P6-201ENST00000426177 609 ntBASIC16.2■□□□□ 0.18
HACD3Q9P035 SPDYE14P-201ENST00000442619 822 ntBASIC16.2■□□□□ 0.18
HACD3Q9P035 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.2■□□□□ 0.18
HACD3Q9P035 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 LINC02447-202ENST00000501888 2146 ntBASIC16.2■□□□□ 0.18
HACD3Q9P035 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HACD3Q9P035 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.2■□□□□ 0.18
HACD3Q9P035 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.2■□□□□ 0.18
HACD3Q9P035 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 AC126177.1-201ENST00000547829 2218 ntBASIC16.2■□□□□ 0.18
HACD3Q9P035 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
HACD3Q9P035 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.2■□□□□ 0.18
HACD3Q9P035 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HACD3Q9P035 AL691432.1-201ENST00000596308 1422 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC092384.3-202ENST00000564646 2873 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HACD3Q9P035 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 AP001160.2-201ENST00000596071 487 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.19■□□□□ 0.18
HACD3Q9P035 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC139530.3-201ENST00000620344 690 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HACD3Q9P035 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC011477.6-201ENST00000604980 1927 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.19■□□□□ 0.18
HACD3Q9P035 AC022532.1-201ENST00000624563 1728 ntBASIC16.19■□□□□ 0.18
HACD3Q9P035 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HACD3Q9P035 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HACD3Q9P035 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HACD3Q9P035 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms