Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 AC106886.4-201ENST00000623557 2502 ntBASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 HNRNPA1P32-201ENST00000396326 963 ntBASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 AL662890.1-201ENST00000396818 632 ntBASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 HIST2H2BC-201ENST00000498492 580 ntBASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 ECM1P1-201ENST00000604092 1279 ntBASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
SLC52A1Q9NWF4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC52A1Q9NWF4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 AC126915.1-201ENST00000522847 1038 ntBASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 AC105129.2-201ENST00000559536 390 ntBASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC52A1Q9NWF4 AC148477.4-201ENST00000613430 1793 ntBASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 TPM3P8-201ENST00000330554 643 ntBASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SLC52A1Q9NWF4 AL354989.2-201ENST00000435838 1540 ntBASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms