Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF304Q9HCX3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 AC009407.1-201ENST00000568958 598 ntBASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
ZNF304Q9HCX3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 MIR661-201ENST00000384842 89 ntBASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 FO393414.2-201ENST00000405153 598 ntBASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ZNF890P-202ENST00000530367 1156 ntBASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 AL512361.1-201ENST00000554200 418 ntBASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 AC010336.2-201ENST00000564226 506 ntBASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF304Q9HCX3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF304Q9HCX3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
ZNF304Q9HCX3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF304Q9HCX3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF304Q9HCX3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms