Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AL031284.1-201ENST00000419297 478 ntBASIC16.12■□□□□ 0.17
VPS11Q9H270 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 UNC93B6-202ENST00000528242 690 ntBASIC16.12■□□□□ 0.17
VPS11Q9H270 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AL009183.1-201ENST00000603760 355 ntBASIC16.12■□□□□ 0.17
VPS11Q9H270 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 AL773604.1-201ENST00000617417 272 ntBASIC16.12■□□□□ 0.17
VPS11Q9H270 AL691432.3-201ENST00000621860 400 ntBASIC16.12■□□□□ 0.17
VPS11Q9H270 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS11Q9H270 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS11Q9H270 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC007292.2-201ENST00000593524 1812 ntBASIC16.11■□□□□ 0.17
VPS11Q9H270 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS11Q9H270 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC009947.1-201ENST00000444350 727 ntBASIC16.11■□□□□ 0.17
VPS11Q9H270 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
VPS11Q9H270 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS11Q9H270 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC010507.1-201ENST00000633895 436 ntBASIC16.11■□□□□ 0.17
VPS11Q9H270 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS11Q9H270 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS11Q9H270 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VPS11Q9H270 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS11Q9H270 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS11Q9H270 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS11Q9H270 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS11Q9H270 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS11Q9H270 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS11Q9H270 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms