Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 AC093724.1-201ENST00000448659 1027 ntBASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 SCARNA20.5-201ENST00000516991 142 ntBASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
UBE2OQ9C0C9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 FO393414.2-201ENST00000405153 598 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 BAATP1-201ENST00000412284 1225 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 FNTAP2-201ENST00000430308 634 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 RPS2P36-201ENST00000456516 831 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AC009486.1-201ENST00000569860 813 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AL008638.5-201ENST00000623814 1298 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AL158212.4-201ENST00000624062 1286 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AC138028.6-201ENST00000616106 1482 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 AC092850.2-201ENST00000623821 2697 ntBASIC17.55■□□□□ 0.4
UBE2OQ9C0C9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AC092068.3-201ENST00000587894 2016 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 SOCS2P1-201ENST00000417727 557 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AC023310.1-201ENST00000554836 735 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 MIR5572-201ENST00000583188 137 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 SPCS2P2-201ENST00000603270 608 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 AL391069.4-201ENST00000609583 481 ntBASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2OQ9C0C9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2OQ9C0C9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms