Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.33■□□□□ 0.2
CIPCQ9C0C6 DOC2GP-204ENST00000639052 2548 ntBASIC16.33■□□□□ 0.2
CIPCQ9C0C6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 KRT8P37-201ENST00000451609 1420 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC138969.3-201ENST00000546612 1459 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC138932.2-201ENST00000548268 1459 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC126755.4-201ENST00000549796 1459 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC023310.3-201ENST00000557027 670 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC100756.1-201ENST00000562736 682 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC138749.3-201ENST00000567691 622 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 CHCHD2P3-201ENST00000603038 451 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 AC116165.1-201ENST00000611806 668 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIPCQ9C0C6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.32■□□□□ 0.2
CIPCQ9C0C6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 CU639417.3-201ENST00000624240 1404 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 DGCR5-201ENST00000399539 862 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 MEP1AP4-201ENST00000423244 1087 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AC244107.1-201ENST00000442033 332 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 CR383656.12-201ENST00000549567 513 ntBASIC16.31■□□□□ 0.2
CIPCQ9C0C6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIPCQ9C0C6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms