Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 EIF4HP1-201ENST00000453115 687 ntBASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP4Q9C0A0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 AC106886.4-201ENST00000623557 2502 ntBASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 AC079178.1-201ENST00000420915 656 ntBASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP4Q9C0A0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 KRT8P19-201ENST00000551916 1455 ntBASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 TPM3P8-201ENST00000330554 643 ntBASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 NUS1P3-201ENST00000423502 862 ntBASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 NDUFV2P1-201ENST00000596415 907 ntBASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP4Q9C0A0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms