Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 KRT17P5-201ENST00000332088 839 ntBASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 RN7SL470P-201ENST00000583069 259 ntBASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL25A1Q9BXS0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 RBPMSLP-201ENST00000433427 502 ntBASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 PGAM1P12-201ENST00000505622 748 ntBASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 NAV1-210ENST00000593583 726 ntBASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 AC015912.3-201ENST00000619432 348 ntBASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL25A1Q9BXS0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AL136309.1-201ENST00000403917 691 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AL354861.1-201ENST00000445213 355 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AL135901.1-201ENST00000451812 333 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC100827.2-201ENST00000563214 1194 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC084781.1-201ENST00000613737 656 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 AC012183.1-201ENST00000625197 499 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL25A1Q9BXS0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms