Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 OR2I1P-210ENST00000642037 4691 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LITAFQ99732 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.63□□□□□ -0.71
LITAFQ99732 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 AL645939.2-201ENST00000427340 991 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.63□□□□□ -0.71
LITAFQ99732 AL365330.1-201ENST00000607459 531 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 TMEM191A-211ENST00000637163 1067 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 AL359881.3-201ENST00000602640 1721 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 ACE3P-201ENST00000423435 1973 ntBASIC10.63□□□□□ -0.71
LITAFQ99732 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LITAFQ99732 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 DGCR9-201ENST00000609630 2415 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC10.62□□□□□ -0.71
LITAFQ99732 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.62□□□□□ -0.71
LITAFQ99732 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 AC117947.1-201ENST00000427448 529 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 ABCD1P5-201ENST00000445663 754 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 AC093724.1-201ENST00000448659 1027 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 AC096582.2-201ENST00000510860 516 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.62□□□□□ -0.71
LITAFQ99732 CLN6-204ENST00000564752 900 ntTSL 3 BASIC10.62□□□□□ -0.71
LITAFQ99732 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.62□□□□□ -0.71
LITAFQ99732 MIR4313-201ENST00000580760 101 ntBASIC10.62□□□□□ -0.71
LITAFQ99732 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms