Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.39■□□□□ 0.21
CDCA3Q99618 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 AL096828.3-201ENST00000615354 462 ntBASIC16.39■□□□□ 0.21
CDCA3Q99618 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.39■□□□□ 0.21
CDCA3Q99618 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDCA3Q99618 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CDCA3Q99618 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 TPM3P8-201ENST00000330554 643 ntBASIC16.38■□□□□ 0.21
CDCA3Q99618 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDCA3Q99618 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.38■□□□□ 0.21
CDCA3Q99618 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 UPF3AP2-201ENST00000457924 1132 ntBASIC16.38■□□□□ 0.21
CDCA3Q99618 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDCA3Q99618 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.38■□□□□ 0.21
CDCA3Q99618 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CDCA3Q99618 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDCA3Q99618 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.38■□□□□ 0.21
CDCA3Q99618 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CDCA3Q99618 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 AL354989.2-201ENST00000435838 1540 ntBASIC16.37■□□□□ 0.21
CDCA3Q99618 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.37■□□□□ 0.21
CDCA3Q99618 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.37■□□□□ 0.21
CDCA3Q99618 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCA3Q99618 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCA3Q99618 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AL590640.2-201ENST00000457038 527 ntBASIC16.37■□□□□ 0.21
CDCA3Q99618 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AC126915.1-201ENST00000522847 1038 ntBASIC16.37■□□□□ 0.21
CDCA3Q99618 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.37■□□□□ 0.21
CDCA3Q99618 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 MIR3619-201ENST00000579667 83 ntBASIC16.37■□□□□ 0.21
CDCA3Q99618 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CDCA3Q99618 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms