Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.08■□□□□ 0.16
NDNQ99608 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.08■□□□□ 0.16
NDNQ99608 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.08■□□□□ 0.16
NDNQ99608 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.08■□□□□ 0.16
NDNQ99608 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.08■□□□□ 0.16
NDNQ99608 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.08■□□□□ 0.16
NDNQ99608 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.08■□□□□ 0.16
NDNQ99608 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.08■□□□□ 0.16
NDNQ99608 MIR4321-201ENST00000592276 80 ntBASIC16.08■□□□□ 0.16
NDNQ99608 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.08■□□□□ 0.16
NDNQ99608 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.08■□□□□ 0.16
NDNQ99608 AC092902.6-201ENST00000641783 218 ntBASIC16.08■□□□□ 0.16
NDNQ99608 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NDNQ99608 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NDNQ99608 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.08■□□□□ 0.16
NDNQ99608 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.08■□□□□ 0.16
NDNQ99608 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.08■□□□□ 0.16
NDNQ99608 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.08■□□□□ 0.16
NDNQ99608 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.08■□□□□ 0.16
NDNQ99608 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NDNQ99608 AC134407.2-201ENST00000625089 1978 ntBASIC16.07■□□□□ 0.16
NDNQ99608 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.07■□□□□ 0.16
NDNQ99608 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.07■□□□□ 0.16
NDNQ99608 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
NDNQ99608 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NDNQ99608 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.07■□□□□ 0.16
NDNQ99608 AL022342.1-201ENST00000400363 863 ntBASIC16.07■□□□□ 0.16
NDNQ99608 TFAMP1-201ENST00000412727 736 ntBASIC16.07■□□□□ 0.16
NDNQ99608 AL671277.1-201ENST00000429656 993 ntBASIC16.07■□□□□ 0.16
NDNQ99608 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.07■□□□□ 0.16
NDNQ99608 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 FOXO1B-201ENST00000504678 1527 ntBASIC16.07■□□□□ 0.16
NDNQ99608 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NDNQ99608 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NDNQ99608 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NDNQ99608 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.06■□□□□ 0.16
NDNQ99608 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 AC063926.3-201ENST00000624734 5658 ntBASIC16.06■□□□□ 0.16
NDNQ99608 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.06■□□□□ 0.16
NDNQ99608 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NDNQ99608 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.06■□□□□ 0.16
NDNQ99608 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.06■□□□□ 0.16
NDNQ99608 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.06■□□□□ 0.16
NDNQ99608 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.06■□□□□ 0.16
NDNQ99608 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.06■□□□□ 0.16
NDNQ99608 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms