Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 GNAQP1-201ENST00000444815 1067 ntBASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 SLED1-202ENST00000512051 380 ntBASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AC015922.1-201ENST00000421102 1152 ntBASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 TP53TG3HP-202ENST00000569755 579 ntBASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK5RAP1Q96SZ6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 AL118508.1-201ENST00000613502 2345 ntBASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP1Q96SZ6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 API5-211ENST00000534695 560 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 RARRES2P5-201ENST00000564013 466 ntBASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms