Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS3Q969F9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS3Q969F9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.68■□□□□ 0.42
HPS3Q969F9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.68■□□□□ 0.42
HPS3Q969F9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HPS3Q969F9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS3Q969F9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS3Q969F9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 SSR4P1-203ENST00000599569 2260 ntBASIC17.68■□□□□ 0.42
HPS3Q969F9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS3Q969F9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HPS3Q969F9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.67■□□□□ 0.42
HPS3Q969F9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.67■□□□□ 0.42
HPS3Q969F9 TSEN15P1-201ENST00000423257 515 ntBASIC17.67■□□□□ 0.42
HPS3Q969F9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.67■□□□□ 0.42
HPS3Q969F9 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.67■□□□□ 0.42
HPS3Q969F9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.67■□□□□ 0.42
HPS3Q969F9 AC007967.4-201ENST00000614700 386 ntBASIC17.67■□□□□ 0.42
HPS3Q969F9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.67■□□□□ 0.42
HPS3Q969F9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HPS3Q969F9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS3Q969F9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS3Q969F9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS3Q969F9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS3Q969F9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HPS3Q969F9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS3Q969F9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS3Q969F9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS3Q969F9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 Z92544.3-201ENST00000624747 417 ntBASIC17.66■□□□□ 0.42
HPS3Q969F9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HPS3Q969F9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS3Q969F9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC105250.1-201ENST00000509378 2057 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS3Q969F9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS3Q969F9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 HIST3H2BA-201ENST00000436555 524 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 EEF1DP4-201ENST00000446006 880 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms