Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRF1Q92994 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 AL139400.1-201ENST00000366220 510 ntBASIC18.78■□□□□ 0.6
BRF1Q92994 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
BRF1Q92994 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 AC109322.1-201ENST00000524499 1264 ntBASIC18.78■□□□□ 0.6
BRF1Q92994 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.78■□□□□ 0.6
BRF1Q92994 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 AL133215.2-201ENST00000609242 977 ntBASIC18.78■□□□□ 0.6
BRF1Q92994 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRF1Q92994 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.78■□□□□ 0.6
BRF1Q92994 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF1Q92994 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRF1Q92994 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 AC136621.1-201ENST00000624017 2304 ntBASIC18.77■□□□□ 0.6
BRF1Q92994 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.77■□□□□ 0.6
BRF1Q92994 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.77■□□□□ 0.6
BRF1Q92994 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.77■□□□□ 0.6
BRF1Q92994 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 AL450472.2-201ENST00000603663 1156 ntBASIC18.77■□□□□ 0.6
BRF1Q92994 RN7SL828P-201ENST00000607615 303 ntBASIC18.77■□□□□ 0.6
BRF1Q92994 LINC00628-201ENST00000628516 1289 ntBASIC18.77■□□□□ 0.6
BRF1Q92994 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF1Q92994 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF1Q92994 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF1Q92994 AC013268.4-201ENST00000637413 2228 ntBASIC18.77■□□□□ 0.59
BRF1Q92994 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRF1Q92994 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.77■□□□□ 0.59
BRF1Q92994 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF1Q92994 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF1Q92994 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BRF1Q92994 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
BRF1Q92994 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 AZGP1P1-201ENST00000411909 902 ntBASIC18.76■□□□□ 0.59
BRF1Q92994 MTND6P24-201ENST00000440466 518 ntBASIC18.76■□□□□ 0.59
BRF1Q92994 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF1Q92994 AL512356.2-201ENST00000546955 174 ntBASIC18.76■□□□□ 0.59
BRF1Q92994 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.76■□□□□ 0.59
BRF1Q92994 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF1Q92994 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BRF1Q92994 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF1Q92994 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BRF1Q92994 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms