Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AC004870.1-201ENST00000315132 882 ntBASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AL773604.1-201ENST00000617417 272 ntBASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
DNAAF1Q8NEP3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 HMGA1P7-201ENST00000406908 502 ntBASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 AC108751.1-201ENST00000490852 363 ntBASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 AL031055.1-201ENST00000606362 631 ntBASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DNAAF1Q8NEP3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 MIR4751-201ENST00000578027 74 ntBASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.11□□□□□ -0.15
DNAAF1Q8NEP3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms