Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS52Q8N1B4 AC079328.2-201ENST00000561241 3354 ntBASIC17.36■□□□□ 0.37
VPS52Q8N1B4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 IGHV3-71-201ENST00000523324 359 ntBASIC17.35■□□□□ 0.37
VPS52Q8N1B4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VPS52Q8N1B4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AL512384.1-201ENST00000406683 331 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SPDYE17-201ENST00000412399 783 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SLC7A15P-201ENST00000424028 1363 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC011495.1-201ENST00000498085 584 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SDHAP3-202ENST00000515467 728 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 HILS1-202ENST00000545329 423 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 WASH4P-201ENST00000564273 1246 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC132938.2-201ENST00000579188 680 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SRD5A3P1-201ENST00000603021 949 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC007431.3-201ENST00000623221 587 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AC004461.2-201ENST00000629517 803 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 AL591163.1-201ENST00000641757 987 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 HYMAI-201ENST00000635591 3347 ntBASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS52Q8N1B4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms