Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC020907.1-201ENST00000616460 1350 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 KRT18P64-201ENST00000434946 1219 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC007551.1-201ENST00000457394 519 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC108725.1-201ENST00000495472 409 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC244093.1-201ENST00000610837 814 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEFF1Q8IYR6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 EEF1DP4-201ENST00000446006 880 ntBASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 AC124283.3-201ENST00000570869 594 ntBASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TMEFF1Q8IYR6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC099398.1-201ENST00000567919 2776 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 C1QBPP1-201ENST00000400117 770 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 HAUS4P1-201ENST00000406739 1145 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC099548.2-209ENST00000480264 625 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 FTH1P14-201ENST00000482930 551 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AL049840.4-201ENST00000602422 811 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms