Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 FTLP1-201ENST00000449155 526 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 EEF1DP6-201ENST00000449232 372 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 RN7SL720P-201ENST00000488178 304 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC134698.3-201ENST00000523880 214 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC106820.3-201ENST00000561653 397 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 RN7SL48P-201ENST00000579283 293 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AL645939.5-201ENST00000606834 243 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC007663.3-201ENST00000609632 465 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 AF254983.2-201ENST00000612331 135 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC008132.1-202ENST00000342005 1389 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC092978.1-202ENST00000637590 1327 ntBASIC19.03■□□□□ 0.64
SLX4Q8IY92 AC005332.8-201ENST00000622750 2735 ntBASIC19.02■□□□□ 0.64
SLX4Q8IY92 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.02■□□□□ 0.64
SLX4Q8IY92 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLX4Q8IY92 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SLX4Q8IY92 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.02■□□□□ 0.63
SLX4Q8IY92 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.02■□□□□ 0.63
SLX4Q8IY92 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 AC013355.1-201ENST00000562625 723 ntBASIC19.02■□□□□ 0.63
SLX4Q8IY92 MIR3907-201ENST00000579424 151 ntBASIC19.02■□□□□ 0.63
SLX4Q8IY92 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SLX4Q8IY92 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.02■□□□□ 0.63
SLX4Q8IY92 AC091544.8-201ENST00000619490 361 ntBASIC19.02■□□□□ 0.63
SLX4Q8IY92 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLX4Q8IY92 PRSS30P-206ENST00000641773 873 ntBASIC19.02■□□□□ 0.63
SLX4Q8IY92 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SLX4Q8IY92 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.01■□□□□ 0.63
SLX4Q8IY92 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 MIR4313-201ENST00000580760 101 ntBASIC19.01■□□□□ 0.63
SLX4Q8IY92 ENPP7P14-201ENST00000621765 1040 ntBASIC19.01■□□□□ 0.63
SLX4Q8IY92 AC079336.7-201ENST00000623428 1078 ntBASIC19.01■□□□□ 0.63
SLX4Q8IY92 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLX4Q8IY92 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLX4Q8IY92 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLX4Q8IY92 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLX4Q8IY92 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19■□□□□ 0.63
SLX4Q8IY92 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms