Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 MIR1202-201ENST00000408529 83 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC004898.1-201ENST00000451057 766 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 HOMER2P2-201ENST00000451621 847 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AKR7A2P1-201ENST00000460134 915 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 BX539320.1-201ENST00000623759 877 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 AC006453.4-201ENST00000636949 1252 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 ME2P1-201ENST00000426028 1970 ntBASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNKSR3Q6P9H4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNKSR3Q6P9H4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.96■□□□□ 0.3
CNKSR3Q6P9H4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.96■□□□□ 0.3
CNKSR3Q6P9H4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.96■□□□□ 0.3
CNKSR3Q6P9H4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.96■□□□□ 0.3
CNKSR3Q6P9H4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AC005052.1-201ENST00000625181 2492 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AL138799.1-201ENST00000448213 1675 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 CD8B2-202ENST00000417670 633 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AC091804.1-201ENST00000486888 567 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SCARNA20.5-201ENST00000516991 142 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AP006547.1-201ENST00000563435 692 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 EEF1DP1-201ENST00000585891 896 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 AL021578.1-201ENST00000613646 709 ntBASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNKSR3Q6P9H4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AC138028.6-201ENST00000616106 1482 ntBASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AL590640.2-201ENST00000457038 527 ntBASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms