Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 GPS2P2-201ENST00000430745 888 ntBASIC19.07■□□□□ 0.64
RNF20Q5VTR2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 EEF1DP4-201ENST00000446006 880 ntBASIC19.07■□□□□ 0.64
RNF20Q5VTR2 AP006288.1-201ENST00000446065 395 ntBASIC19.07■□□□□ 0.64
RNF20Q5VTR2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 AC063926.3-201ENST00000624734 5658 ntBASIC19.07■□□□□ 0.64
RNF20Q5VTR2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF20Q5VTR2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 AC026150.2-201ENST00000564693 1156 ntBASIC19.06■□□□□ 0.64
RNF20Q5VTR2 AC105021.1-202ENST00000570572 669 ntBASIC19.06■□□□□ 0.64
RNF20Q5VTR2 AL450472.2-201ENST00000603663 1156 ntBASIC19.06■□□□□ 0.64
RNF20Q5VTR2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF20Q5VTR2 AC018892.3-201ENST00000623986 2499 ntBASIC19.06■□□□□ 0.64
RNF20Q5VTR2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 NORAD-201ENST00000565493 5339 ntBASIC19.05■□□□□ 0.64
RNF20Q5VTR2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms