Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCAPQ12770 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCAPQ12770 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCAPQ12770 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SCAPQ12770 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.42■□□□□ 0.22
SCAPQ12770 AC241585.1-201ENST00000433527 519 ntBASIC16.42■□□□□ 0.22
SCAPQ12770 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.42■□□□□ 0.22
SCAPQ12770 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.42■□□□□ 0.22
SCAPQ12770 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SCAPQ12770 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.42■□□□□ 0.22
SCAPQ12770 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
SCAPQ12770 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SCAPQ12770 AC105917.1-201ENST00000506637 2539 ntBASIC16.42■□□□□ 0.22
SCAPQ12770 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAPQ12770 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAPQ12770 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.41■□□□□ 0.22
SCAPQ12770 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAPQ12770 AC074338.1-201ENST00000416825 156 ntBASIC16.41■□□□□ 0.22
SCAPQ12770 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 AC009477.1-201ENST00000452936 217 ntBASIC16.41■□□□□ 0.22
SCAPQ12770 RN7SL692P-201ENST00000464677 288 ntBASIC16.41■□□□□ 0.22
SCAPQ12770 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAPQ12770 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.41■□□□□ 0.22
SCAPQ12770 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 AL662799.1-202ENST00000614205 422 ntBASIC16.41■□□□□ 0.22
SCAPQ12770 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SCAPQ12770 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAPQ12770 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAPQ12770 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCAPQ12770 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCAPQ12770 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCAPQ12770 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCAPQ12770 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAPQ12770 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAPQ12770 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms