Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.89□□□□□ -0.19
UBA52P62987 STK25P1-201ENST00000585406 838 ntBASIC13.89□□□□□ -0.19
UBA52P62987 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.89□□□□□ -0.19
UBA52P62987 AC027612.4-201ENST00000605371 583 ntBASIC13.89□□□□□ -0.19
UBA52P62987 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UBA52P62987 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.89□□□□□ -0.19
UBA52P62987 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.89□□□□□ -0.19
UBA52P62987 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.89□□□□□ -0.19
UBA52P62987 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
UBA52P62987 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.89□□□□□ -0.19
UBA52P62987 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBA52P62987 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
UBA52P62987 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 TSEN15P1-201ENST00000423257 515 ntBASIC13.88□□□□□ -0.19
UBA52P62987 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.88□□□□□ -0.19
UBA52P62987 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.88□□□□□ -0.19
UBA52P62987 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 RHOQP3-201ENST00000437982 621 ntBASIC13.88□□□□□ -0.19
UBA52P62987 AC074386.1-202ENST00000463561 864 ntBASIC13.88□□□□□ -0.19
UBA52P62987 HLA-J-202ENST00000469281 1241 ntBASIC13.88□□□□□ -0.19
UBA52P62987 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.88□□□□□ -0.19
UBA52P62987 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 AL353135.1-201ENST00000606729 504 ntBASIC13.88□□□□□ -0.19
UBA52P62987 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 AC007064.4-201ENST00000637740 555 ntBASIC13.88□□□□□ -0.19
UBA52P62987 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 AC025580.3-201ENST00000617932 1424 ntBASIC13.88□□□□□ -0.19
UBA52P62987 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.88□□□□□ -0.19
UBA52P62987 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBA52P62987 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.88□□□□□ -0.19
UBA52P62987 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
UBA52P62987 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms