Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 RPL37AP1-201ENST00000412502 279 ntBASIC11.89□□□□□ -0.51
CMC4P56277 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.89□□□□□ -0.51
CMC4P56277 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 INGX-202ENST00000489074 768 ntBASIC11.89□□□□□ -0.51
CMC4P56277 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 TIMM17BP1-201ENST00000545713 516 ntBASIC11.89□□□□□ -0.51
CMC4P56277 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.89□□□□□ -0.51
CMC4P56277 DUX4L27-201ENST00000554796 1261 ntBASIC11.89□□□□□ -0.51
CMC4P56277 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.89□□□□□ -0.51
CMC4P56277 AC027796.2-201ENST00000575326 344 ntBASIC11.89□□□□□ -0.51
CMC4P56277 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.89□□□□□ -0.51
CMC4P56277 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CMC4P56277 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CMC4P56277 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.89□□□□□ -0.51
CMC4P56277 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CMC4P56277 AL136982.4-201ENST00000437689 1740 ntBASIC11.89□□□□□ -0.51
CMC4P56277 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 AC100757.3-201ENST00000622361 1406 ntBASIC11.88□□□□□ -0.51
CMC4P56277 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.88□□□□□ -0.51
CMC4P56277 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.88□□□□□ -0.51
CMC4P56277 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 AC093214.1-201ENST00000511688 1107 ntBASIC11.88□□□□□ -0.51
CMC4P56277 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.88□□□□□ -0.51
CMC4P56277 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.88□□□□□ -0.51
CMC4P56277 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
CMC4P56277 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.88□□□□□ -0.51
CMC4P56277 SPDYE12P-201ENST00000618416 771 ntBASIC11.88□□□□□ -0.51
CMC4P56277 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
CMC4P56277 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 REXO1L1P-202ENST00000608646 1974 ntBASIC11.88□□□□□ -0.51
CMC4P56277 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 AC069224.1-201ENST00000566372 1715 ntBASIC11.88□□□□□ -0.51
CMC4P56277 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
CMC4P56277 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.88□□□□□ -0.51
CMC4P56277 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CMC4P56277 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms