Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
APOC4P55056 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 EEF1DP4-201ENST00000446006 880 ntBASIC11.69□□□□□ -0.54
APOC4P55056 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC4P55056 AC004461.2-201ENST00000629517 803 ntBASIC11.69□□□□□ -0.54
APOC4P55056 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AC005052.1-201ENST00000625181 2492 ntBASIC11.69□□□□□ -0.54
APOC4P55056 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 AC011676.5-201ENST00000624864 2660 ntBASIC11.69□□□□□ -0.54
APOC4P55056 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
APOC4P55056 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 AGGF1P2-201ENST00000426656 2106 ntBASIC11.68□□□□□ -0.54
APOC4P55056 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.68□□□□□ -0.54
APOC4P55056 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
APOC4P55056 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 AC104596.2-201ENST00000512793 793 ntBASIC11.68□□□□□ -0.54
APOC4P55056 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 AC005225.4-201ENST00000557330 545 ntBASIC11.68□□□□□ -0.54
APOC4P55056 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.68□□□□□ -0.54
APOC4P55056 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 SPDYE22P-201ENST00000582158 798 ntBASIC11.68□□□□□ -0.54
APOC4P55056 AC025048.3-201ENST00000590609 569 ntBASIC11.68□□□□□ -0.54
APOC4P55056 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 SRD5A3P1-201ENST00000603021 949 ntBASIC11.68□□□□□ -0.54
APOC4P55056 AC239800.4-201ENST00000603712 296 ntBASIC11.68□□□□□ -0.54
APOC4P55056 AC012645.4-201ENST00000610691 1061 ntBASIC11.68□□□□□ -0.54
APOC4P55056 AC005702.4-201ENST00000618393 416 ntBASIC11.68□□□□□ -0.54
APOC4P55056 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
APOC4P55056 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
APOC4P55056 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.68□□□□□ -0.54
APOC4P55056 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms