Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
CSNK1EP49674 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 MSTO2P-201ENST00000314835 1709 ntBASIC15.57■□□□□ 0.08
CSNK1EP49674 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1EP49674 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1EP49674 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CSNK1EP49674 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 AC092933.1-201ENST00000393644 945 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.56■□□□□ 0.08
CSNK1EP49674 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 AC009486.1-201ENST00000569860 813 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 AL450472.2-201ENST00000603663 1156 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 MIR6787-201ENST00000616675 61 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 TUBB1P2-201ENST00000422712 1306 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 TUBB1P1-201ENST00000503144 1300 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 AC134312.5-201ENST00000568031 1313 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 KRT8P44-201ENST00000441609 1350 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CSNK1EP49674 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.56■□□□□ 0.08
CSNK1EP49674 AL133338.1-201ENST00000565695 1517 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 CROCCP1-201ENST00000426910 5675 ntBASIC15.56■□□□□ 0.08
CSNK1EP49674 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
CSNK1EP49674 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.56■□□□□ 0.08
CSNK1EP49674 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSNK1EP49674 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1EP49674 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.55■□□□□ 0.08
CSNK1EP49674 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 AP001282.1-201ENST00000531301 1499 ntBASIC15.55■□□□□ 0.08
CSNK1EP49674 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AC093433.1-201ENST00000458048 571 ntBASIC15.55■□□□□ 0.08
CSNK1EP49674 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 FTH1P14-201ENST00000482930 551 ntBASIC15.55■□□□□ 0.08
CSNK1EP49674 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.55■□□□□ 0.08
CSNK1EP49674 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1EP49674 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.55■□□□□ 0.08
CSNK1EP49674 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1EP49674 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSNK1EP49674 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CSNK1EP49674 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSNK1EP49674 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms