Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM3P40198 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM3P40198 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM3P40198 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
CEACAM3P40198 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.08□□□□□ -0.31
CEACAM3P40198 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM3P40198 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
CEACAM3P40198 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CEACAM3P40198 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM3P40198 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM3P40198 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM3P40198 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM3P40198 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 AL161772.1-201ENST00000610494 4412 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms