Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GDNFP39905 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GDNFP39905 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GDNFP39905 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.99□□□□□ -0.17
GDNFP39905 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
GDNFP39905 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 PAWRP1-201ENST00000451083 565 ntBASIC13.99□□□□□ -0.17
GDNFP39905 RPS15P9-201ENST00000494093 319 ntBASIC13.99□□□□□ -0.17
GDNFP39905 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.99□□□□□ -0.17
GDNFP39905 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 AL805961.1-202ENST00000641562 540 ntBASIC13.99□□□□□ -0.17
GDNFP39905 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GDNFP39905 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.99□□□□□ -0.17
GDNFP39905 AC091951.1-201ENST00000512854 2465 ntBASIC13.99□□□□□ -0.17
GDNFP39905 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDNFP39905 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 PI4KAP1-204ENST00000612579 1703 ntBASIC13.98□□□□□ -0.17
GDNFP39905 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GDNFP39905 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 SBF1P1-201ENST00000444527 5631 ntBASIC13.98□□□□□ -0.17
GDNFP39905 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 AC008677.1-201ENST00000519230 1561 ntBASIC13.98□□□□□ -0.17
GDNFP39905 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.98□□□□□ -0.17
GDNFP39905 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.98□□□□□ -0.17
GDNFP39905 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 RNA5SP419-201ENST00000515908 135 ntBASIC13.98□□□□□ -0.17
GDNFP39905 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 AC105339.3-201ENST00000560043 636 ntBASIC13.98□□□□□ -0.17
GDNFP39905 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms