Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCNN1AP37088 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.54■□□□□ 0.24
SCNN1AP37088 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
SCNN1AP37088 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.54■□□□□ 0.24
SCNN1AP37088 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 AC015922.1-201ENST00000421102 1152 ntBASIC16.53■□□□□ 0.24
SCNN1AP37088 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.53■□□□□ 0.24
SCNN1AP37088 AC092337.1-201ENST00000568699 1129 ntBASIC16.53■□□□□ 0.24
SCNN1AP37088 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.53■□□□□ 0.24
SCNN1AP37088 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 TMBIM7P-203ENST00000641617 1718 ntBASIC16.53■□□□□ 0.24
SCNN1AP37088 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
SCNN1AP37088 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCNN1AP37088 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCNN1AP37088 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.52■□□□□ 0.24
SCNN1AP37088 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.52■□□□□ 0.24
SCNN1AP37088 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.52■□□□□ 0.24
SCNN1AP37088 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.52■□□□□ 0.24
SCNN1AP37088 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.52■□□□□ 0.24
SCNN1AP37088 BASP1P1-201ENST00000430708 665 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.52■□□□□ 0.24
SCNN1AP37088 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.52■□□□□ 0.24
SCNN1AP37088 AC044860.1-202ENST00000559481 777 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 AC009407.1-201ENST00000568958 598 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 AC005498.2-205ENST00000593218 784 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.52■□□□□ 0.24
SCNN1AP37088 AL390754.1-201ENST00000619088 582 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 AL109936.8-201ENST00000641772 604 ntBASIC16.52■□□□□ 0.24
SCNN1AP37088 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.52■□□□□ 0.24
SCNN1AP37088 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.52■□□□□ 0.24
SCNN1AP37088 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCNN1AP37088 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.52■□□□□ 0.24
SCNN1AP37088 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCNN1AP37088 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCNN1AP37088 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.52■□□□□ 0.23
SCNN1AP37088 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.52■□□□□ 0.23
SCNN1AP37088 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.52■□□□□ 0.23
SCNN1AP37088 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.51■□□□□ 0.23
SCNN1AP37088 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCNN1AP37088 AC022144.1-201ENST00000602255 1580 ntBASIC16.51■□□□□ 0.23
SCNN1AP37088 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCNN1AP37088 CICP13-201ENST00000422015 2789 ntBASIC16.51■□□□□ 0.23
SCNN1AP37088 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms