Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
CCND1P24385 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 HMGA1P7-201ENST00000406908 502 ntBASIC16.16■□□□□ 0.18
CCND1P24385 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.16■□□□□ 0.18
CCND1P24385 AC007967.2-201ENST00000432613 625 ntBASIC16.16■□□□□ 0.18
CCND1P24385 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.16■□□□□ 0.18
CCND1P24385 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 SLC25A1P1-201ENST00000528351 927 ntBASIC16.16■□□□□ 0.18
CCND1P24385 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CCND1P24385 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
CCND1P24385 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.16■□□□□ 0.18
CCND1P24385 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.16■□□□□ 0.18
CCND1P24385 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 TMBIM7P-203ENST00000641617 1718 ntBASIC16.16■□□□□ 0.18
CCND1P24385 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 AC136621.1-201ENST00000624017 2304 ntBASIC16.16■□□□□ 0.18
CCND1P24385 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCND1P24385 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCND1P24385 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.15■□□□□ 0.18
CCND1P24385 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.15■□□□□ 0.18
CCND1P24385 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.15■□□□□ 0.18
CCND1P24385 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCND1P24385 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCND1P24385 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 RNU1-129P-201ENST00000384064 167 ntBASIC16.15■□□□□ 0.18
CCND1P24385 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCND1P24385 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.15■□□□□ 0.18
CCND1P24385 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
CCND1P24385 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.15■□□□□ 0.18
CCND1P24385 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 U1.21-201ENST00000580816 167 ntBASIC16.15■□□□□ 0.18
CCND1P24385 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 AL031055.1-201ENST00000606362 631 ntBASIC16.15■□□□□ 0.18
CCND1P24385 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CCND1P24385 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.15■□□□□ 0.18
CCND1P24385 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCND1P24385 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCND1P24385 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCND1P24385 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CCND1P24385 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCND1P24385 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.14■□□□□ 0.17
CCND1P24385 AL512652.2-201ENST00000625156 1716 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms