Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNA3P22001 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.26■□□□□ 0.67
KCNA3P22001 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 AL133267.1-201ENST00000398220 340 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 AL355334.1-201ENST00000417713 215 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA3P22001 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 MIR3147-201ENST00000577811 66 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
KCNA3P22001 AP000346.4-201ENST00000614827 381 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 BX539320.1-201ENST00000623759 877 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA3P22001 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 AC008132.1-202ENST00000342005 1389 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 AP001282.1-201ENST00000531301 1499 ntBASIC19.26■□□□□ 0.67
KCNA3P22001 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA3P22001 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KCNA3P22001 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA3P22001 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA3P22001 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KCNA3P22001 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 KLF2P2-201ENST00000416807 1039 ntBASIC19.25■□□□□ 0.67
KCNA3P22001 AC079178.1-201ENST00000420915 656 ntBASIC19.25■□□□□ 0.67
KCNA3P22001 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNA3P22001 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 AC104784.1-201ENST00000473096 294 ntBASIC19.25■□□□□ 0.67
KCNA3P22001 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNA3P22001 AC022217.1-201ENST00000521069 738 ntBASIC19.25■□□□□ 0.67
KCNA3P22001 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNA3P22001 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNA3P22001 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
KCNA3P22001 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNA3P22001 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA3P22001 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA3P22001 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KCNA3P22001 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA3P22001 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 RNU1-114P-201ENST00000365297 166 ntBASIC19.24■□□□□ 0.67
KCNA3P22001 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNA3P22001 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNA3P22001 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.24■□□□□ 0.67
KCNA3P22001 RN7SL11P-201ENST00000471305 293 ntBASIC19.24■□□□□ 0.67
KCNA3P22001 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNA3P22001 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.24■□□□□ 0.67
KCNA3P22001 AC024681.1-201ENST00000521917 487 ntBASIC19.24■□□□□ 0.67
KCNA3P22001 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
KCNA3P22001 AC005730.2-201ENST00000564549 1184 ntBASIC19.24■□□□□ 0.67
KCNA3P22001 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA3P22001 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
KCNA3P22001 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA3P22001 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA3P22001 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA3P22001 AC148477.4-201ENST00000613430 1793 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms