Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM21P19474 ALG1L5P-201ENST00000482043 771 ntBASIC17.68■□□□□ 0.42
TRIM21P19474 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM21P19474 MIR4469-201ENST00000583919 79 ntBASIC17.68■□□□□ 0.42
TRIM21P19474 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 AC026120.1-201ENST00000611536 926 ntBASIC17.68■□□□□ 0.42
TRIM21P19474 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 PPT1-215ENST00000641471 2368 ntBASIC17.68■□□□□ 0.42
TRIM21P19474 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM21P19474 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM21P19474 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM21P19474 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM21P19474 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM21P19474 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM21P19474 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 AC126755.1-201ENST00000525846 6405 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 YBX1P5-201ENST00000509441 847 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM21P19474 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM21P19474 AC092902.6-201ENST00000641783 218 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM21P19474 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM21P19474 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM21P19474 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM21P19474 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM21P19474 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM21P19474 AC023824.1-201ENST00000562945 2975 ntBASIC17.67■□□□□ 0.42
TRIM21P19474 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 TFAMP1-201ENST00000412727 736 ntBASIC17.66■□□□□ 0.42
TRIM21P19474 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
TRIM21P19474 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM21P19474 AC004967.1-201ENST00000453589 447 ntBASIC17.66■□□□□ 0.42
TRIM21P19474 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 IGHV3-62-201ENST00000520057 340 ntBASIC17.66■□□□□ 0.42
TRIM21P19474 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM21P19474 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM21P19474 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM21P19474 SNHG9-202ENST00000564014 471 ntBASIC17.66■□□□□ 0.42
TRIM21P19474 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 AC092850.2-201ENST00000623821 2697 ntBASIC17.66■□□□□ 0.42
TRIM21P19474 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM21P19474 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM21P19474 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM21P19474 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms