Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.17■□□□□ 0.34
CD58P19256 AC093512.1-201ENST00000617969 520 ntBASIC17.17■□□□□ 0.34
CD58P19256 SPDYE12P-201ENST00000618416 771 ntBASIC17.17■□□□□ 0.34
CD58P19256 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.17■□□□□ 0.34
CD58P19256 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.17■□□□□ 0.34
CD58P19256 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.17■□□□□ 0.34
CD58P19256 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.17■□□□□ 0.34
CD58P19256 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CD58P19256 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CD58P19256 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD58P19256 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 AC105917.1-201ENST00000506637 2539 ntBASIC17.16■□□□□ 0.34
CD58P19256 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CD58P19256 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.16■□□□□ 0.34
CD58P19256 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
CD58P19256 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.16■□□□□ 0.34
CD58P19256 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.16■□□□□ 0.34
CD58P19256 AC067863.1-201ENST00000494933 530 ntBASIC17.16■□□□□ 0.34
CD58P19256 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.16■□□□□ 0.34
CD58P19256 AC015911.4-201ENST00000588022 1070 ntBASIC17.16■□□□□ 0.34
CD58P19256 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CD58P19256 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD58P19256 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CD58P19256 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD58P19256 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.16■□□□□ 0.34
CD58P19256 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CD58P19256 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.15■□□□□ 0.34
CD58P19256 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CD58P19256 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 CETN4P-206ENST00000642099 2168 ntBASIC17.15■□□□□ 0.34
CD58P19256 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CD58P19256 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CD58P19256 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CD58P19256 MIR943-201ENST00000401286 94 ntBASIC17.15■□□□□ 0.34
CD58P19256 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.15■□□□□ 0.34
CD58P19256 AC069120.2-201ENST00000524091 540 ntBASIC17.15■□□□□ 0.34
CD58P19256 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.15■□□□□ 0.34
CD58P19256 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.15■□□□□ 0.34
CD58P19256 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CD58P19256 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CD58P19256 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
CD58P19256 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.15■□□□□ 0.34
CD58P19256 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.15■□□□□ 0.34
CD58P19256 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CD58P19256 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD58P19256 FO538757.1-201ENST00000623083 1397 ntBASIC17.15■□□□□ 0.34
CD58P19256 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.15■□□□□ 0.34
CD58P19256 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD58P19256 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.14■□□□□ 0.34
CD58P19256 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CD58P19256 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.14■□□□□ 0.34
CD58P19256 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms