Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.41■□□□□ 0.38
VTNP04004 AC112492.5-201ENST00000421897 457 ntBASIC17.41■□□□□ 0.38
VTNP04004 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.41■□□□□ 0.38
VTNP04004 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.41■□□□□ 0.38
VTNP04004 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.41■□□□□ 0.38
VTNP04004 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.41■□□□□ 0.38
VTNP04004 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.41■□□□□ 0.38
VTNP04004 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.41■□□□□ 0.38
VTNP04004 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.41■□□□□ 0.38
VTNP04004 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
VTNP04004 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VTNP04004 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VTNP04004 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VTNP04004 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTNP04004 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 KRT17P8-201ENST00000540749 863 ntBASIC17.4■□□□□ 0.38
VTNP04004 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.4■□□□□ 0.38
VTNP04004 AL359881.2-201ENST00000602973 570 ntBASIC17.4■□□□□ 0.38
VTNP04004 AL162274.1-201ENST00000617191 1098 ntBASIC17.4■□□□□ 0.38
VTNP04004 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VTNP04004 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.4■□□□□ 0.38
VTNP04004 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTNP04004 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VTNP04004 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VTNP04004 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
VTNP04004 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.39■□□□□ 0.37
VTNP04004 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.39■□□□□ 0.37
VTNP04004 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VTNP04004 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.39■□□□□ 0.37
VTNP04004 AC007274.1-201ENST00000439805 662 ntBASIC17.39■□□□□ 0.37
VTNP04004 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.39■□□□□ 0.37
VTNP04004 AC007389.4-201ENST00000454674 793 ntBASIC17.39■□□□□ 0.37
VTNP04004 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.39■□□□□ 0.37
VTNP04004 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.39■□□□□ 0.37
VTNP04004 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.39■□□□□ 0.37
VTNP04004 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 RPSAP52-203ENST00000622976 1023 ntBASIC17.39■□□□□ 0.37
VTNP04004 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.39■□□□□ 0.37
VTNP04004 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms